Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917351.1_cds_XP_016466959.1_59760
CDS Infomation

[gene=LOC107789624] [db_xref=GeneID:107789624] [protein=heparanase-like protein 3] [protein_id=XP_016466959.1] [location=join(20839..21093,22225..22261,22366..22549,22679..22827,23467..23697,23773..23962,24053..24178,24329..24428,24679..25047)] [gbkey=CDS]
Sequence

ATGGCTTCTTTGTTCAGCTGCTTCTTGGAGTTGTATTTCTTGCTATTGTTGTTGTACAAT
AGCCAATGTTCAAGAGCAGAAGAGTCTTCGTCAAAAAGTAGTGCTAGTTTTGAAAAGGGG
AGTATTTACATTGATGGGTCAGCAGCCATTGCAAAGATAGATGAGGATTTCATTTGTGCA
ACCTTAGATTGGTGGCCTTCTAATAAATGTGATTATGGAACTTGTAGCTGGGGAAATTCT
TCTCTCCTTAATCTTGATCTAAGCAACAAGGTTTTGTTGAATGCAATTAGAGCGTTTTCG
CCGTTAAAAATTAGACTCGGAGGCACATTGCAAGACAAAATAGTATACCAAACGGCGCAT
TATGAGCAACCATGTTCTCCTTTTCTCCTTAATAATAAAGAGTTGTTTGGCTTCACCCAA
GGTTGCTTACCTTTGTCTCGTTGGGATGAACTCAACCAATTCTTCAAGAAAACGGGGGCA
AAAGTAACTTTTGGGTTGAATGCTTTAAATGGAAAGACGATAGCTCCTAATGGCTCTGCT
TTGGGAGATTGGGATTCCAGCAATGCAGAGTCTTTCATCAGATATACGGTTAGCAGAGGT
TATACTATCCTCGGCTGGGAACTTGGAAATGAATTGAATGGAAATGGAATTGGTGCAAAT
ATCACAGCCAATCAGTACAGCCGTGATGTCATCGCACTTCACAAATTACTGCAAGAAATA
TACAAAGGGAAGGACGTTATGCCATTAGTCCTTGCACCAGGAGGAATATTTGACGTTGTT
TGGTTCTCAAAGCTTATAGATAAAGCATCCAATTATCTTCAAGTGGTTACACATCACATT
TACAATGTTGGCGGAGGCAATGACAGCGACCTAGTTCAGAAAATACTTGATCCTTCTCAT
CTGGATGAAGACTCCGAAATATTCAGACATGTTCAAGGTGTTCTCCAAAAGTTTGGAACT
TCATCAGTAGCATGGGTTGGTGAAAGTGGAGGGGTTTATAACAGTGGTCGCGATCTTGTT
TCCAATAGCTTTGTGTCCAGCTTTTGGTATTTGGATCAGCTTGGGATGTCAGCCACGTTC
GACACTAAGACATATTGTCGACAAACATTGGTTGGTGGAAACTATGGTCTCCTCAATACC
ATAACTTTTCATCCAAATCCTGATTATTATGGCGCTCTTCTTTGGCACCGTTTGATGGGA
AGGTCTGTTCTGTCAACACAATTCAAAGGAACGAAAAAGCTACGAGCTTATACCCACTGT
TCAAAATCTTCTGACGGAATCACACTGTTGTTGATCAACATGGATGGTGGTGCAACGGTT
AATGTAAGTGTTTCGGTCACACTTGCTAACGCAAACAAGGTGTCACTGCTGCTGCGAGAC
ATAAATGATCAGAATCCGAGACACGAAATCTGGAGGGAAGAATATCACCTTACAGCCAAA
GATGGTGAATTACATAGCCAAACAGTGCTTTTGAATGAAAAGGAACTTAGTGTAGATCAT
TTTGGAAGAATCCCTCACTTGGAACCTCTACGAGTGAAATCGTCCGAACCATTAGCTATT
GCTCCTTTCTCAATTGTATTTGTTGACATCCCCATTGTTCAAGTTCCTGCTTGCAGTATG
TTTACCAGAGAGTACATGTAA

Peptide Sequence

PEP ID

XP_016466959.1
PEP Infomation

PREDICTED: heparanase-like protein 3 [Nicotiana tabacum]
Sequence

MASLFSCFLELYFLLLLLYNSQCSRAEESSSKSSASFEKGSIYIDGSAAIAKIDEDFICA
TLDWWPSNKCDYGTCSWGNSSLLNLDLSNKVLLNAIRAFSPLKIRLGGTLQDKIVYQTAH
YEQPCSPFLLNNKELFGFTQGCLPLSRWDELNQFFKKTGAKVTFGLNALNGKTIAPNGSA
LGDWDSSNAESFIRYTVSRGYTILGWELGNELNGNGIGANITANQYSRDVIALHKLLQEI
YKGKDVMPLVLAPGGIFDVVWFSKLIDKASNYLQVVTHHIYNVGGGNDSDLVQKILDPSH
LDEDSEIFRHVQGVLQKFGTSSVAWVGESGGVYNSGRDLVSNSFVSSFWYLDQLGMSATF
DTKTYCRQTLVGGNYGLLNTITFHPNPDYYGALLWHRLMGRSVLSTQFKGTKKLRAYTHC
SKSSDGITLLLINMDGGATVNVSVSVTLANANKVSLLLRDINDQNPRHEIWREEYHLTAK
DGELHSQTVLLNEKELSVDHFGRIPHLEPLRVKSSEPLAIAPFSIVFVDIPIVQVPACSM
FTREYM

Transcript Sequence

Gene sequence data has not been registered.